From: Mitochondrial mutations and metabolic adaptation in pancreatic cancer
Cell line | Gene | Chrom | Position | Variant Class | Ref. Allele | Tumour Allele 1 | Tumour Allele 2 | dbSNP RS | Normal Allele 1 | Normal Allele 2 | Bp change | AA change |
---|---|---|---|---|---|---|---|---|---|---|---|---|
TKCC-02 | TRIT1 | 1 | 40319722 | Nonsense | G | A | G | novel | G | G | G > A | R112* |
TKCC-03 | None detected | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
TKCC-04 | MRPS21 | 1 | 150266837 | Silent | G | C | G | novel | G | G | 113G > C | G17G |
 | TP53 | 17 | 7578406 | Missense | C | T | T | rs28934578 | C | C | 524C > T | R175H |
 | ACACA | 17 | 35615179 | Missense | C | A | C | novel | C | C | 2099C > A | R539S |
 | CPT1C | 19 | 50203981 | Missense | G | A | G | novel | G | G | 694G > A | A108T |
 | PIK3CA | 3 | 178952085 | Missense | A | A | T | rs121913279 | A | A | 3297A > T | H1047L |
 | PDHA2 | 4 | 96761551 | Missense | T | C | T | novel | T | T | 313 T > C | F84L |
TKCC-07 | None detected | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
TKCC-09 | AKT3 | 1 | 243736250 | Missense | T | C | T | novel | T | T | 863 T > C | K266R |
 | YME1L1 | 10 | 27437884 | Missense | T | G | T | novel | T | T | 301 T > G | Q40P |
 | ADCK4 | 19 | 41208536 | Missense | G | A | A | novel | G | G | 1164G > A | R288C |
TKCC-10 | None detected | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
TKCC-15-LO | MTCP1 | X | 154293944 | Missense | G | A | G | novel | G | G | G > A | R76C |
TKCC-16-LO | HMGCL | 1 | 24143254 | Missense | C | A | C | novel | C | C | 303C > A | D87Y |
 | ADCK4 | 19 | 41198257 | Missense | C | C | G | novel | C | C | 1620C > G | E440Q |
 | AGXT2 | 5 | 35013131 | Silent | C | C | T | novel | C | C | 1317C > T | A327A |
TKCC-17-LO | TP53 | 17 | 7578553 | Splice Site | T | C | C | novel | T | T | 377 T > C | Y126C |
TKCC-18-LO | TARS2 | 1 | 150477113 | Missense | C | C | T | novel | C | C | C > T | A575V |
TKCC-19-LO | None detected | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
TKCC-26-LO | LDHB | 12 | 21788484 | Missense | C | A | C | novel | C | C | C > A | D333Y |
 | ADSL | 22 | 40676075 | Silent | G | A | G | novel | G | G | G > A |  |