Fig. 2

Illustration of plotting capabilities. a–f Standard plots included in the tool, with default parameters and colours. a Bar plot showing mean and standard deviation (SD). b Individual data-points with mean and SD. c Violin plot showing the distribution and the median (only available for at least 5 replicates). d Replication validation with points, showing the experimental replicates (only when experimental replicates are defined). e Boxplot (only available for at least 10 replicates). f Replication validation with bars, showing the experimental replicates (only when experimental replicates are defined). g–j Modifications on the plots allowing more flexibility, including user defined order and colours. g Modified text elements. h Hollow bars with added data points, removed grid lines, increased height and 90° direction on x-axis. i Hollow violin plot with statistics (t test with multiple pairwise comparisons). j Bar plot with decreased height and statistics (t test against spleen sample). k Points and error with increased width, legend instead of x-axis labels and added sample counts