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Table 2 Kinetic models. Selected kinetic models of metabolic pathways, focusing on reaction kinetics and parameters for mammalian cells

From: Mathematical models of cancer metabolism

Pathway

Tissue

Major conclusion

Reference

Glycolysis

Cancer cells

Glycolysis has different control steps depending on cell line

[88]

Glycolysis

Cancer cells

GAPDH is the rate limiting step of glycolysis

[89]

Pentose phosphate pathway

Hepatocytes

G6P dehydrogenase controls the oxidative rate and transketolase the non-oxidative rate

[90]

One-carbon metabolism

Hepatocytes

Mitochondrial formate is the major source of cytosolic one-carbon units in proliferating hepatocytes

[91]

H2O2 elimination

Endothelial cells

GSSG reductase controls the NAPDH dependent H2O2 elimination

[92]

Mitochondria

Hepatocytes

The rate of superoxide generation is a function of the proton electrochemical potential

[93]

Central metabolism

Cancer cells

Repression of transaldolase and succinyl-CoA ligase and the synergistic combination of transaldolase and serine hydromethyltransferase significantly reduce growth rate

[94]